Rev Language Reference


dnSerialSampledBirthDeath

Aliases

  • dnSSBDP
  • dnFBDP
  • dnSkylineBDP

Usage

dnSerialSampledBirthDeath(RealPos rootAge/originAge, RealPos lambda, RealPos mu, RealPos psi, Probability rho, RealPos[] timeline, RealPos[] lambdaTimes, RealPos[] muTimes, RealPos[] psiTimes, RealPos[] rhoTimes, String condition, Taxon[] taxa)

Arguments

rootAge/originAge : RealPos (pass by const reference)
The start time of the process.
lambda : RealPos (pass by const reference)
The speciation rate(s).
mu : RealPos (pass by const reference)
The extinction rate(s).
Default : 0
psi : RealPos (pass by const reference)
The serial sampling rate(s).
Default : 0
rho : Probability (pass by const reference)
The episodic taxon sampling fraction(s).
Default : 1
timeline : RealPos[] (pass by const reference)
The rate interval change times of the piecewise constant process.
Default : NULL
lambdaTimes : RealPos[] (pass by const reference)
The speciation rate change times.
Default : NULL
muTimes : RealPos[] (pass by const reference)
The extinction rate change times.
Default : NULL
psiTimes : RealPos[] (pass by const reference)
The serial sampling rate change times.
Default : NULL
rhoTimes : RealPos[] (pass by const reference)
The episodic taxon sampling fraction change times.
Default : NULL
condition : String (pass by value)
The condition of the process.
Default : time
Options : time|survival
taxa : Taxon[] (pass by const reference)
The taxa used for initialization.

Domain Type