Rev Language Reference

`ContinuousCharacterData`

Methods

[](Natural index)
addMissingTaxa(String taxon)
excludeAll()
excludeCharacter(Natural pos)
excludeCharacter(Natural[] ...)
excludeTaxa(String taxon)
excludeTaxa(String[] taxa)
filename()
get(Natural i, Natural j)
getIncludedCharacterIndices()
getPairwiseSpeciesDifference(Natural charIndex)
getTaxon(String name)
includeAll()
includeCharacter(Natural ...)
includeCharacter(Natural[] ...)
includeTaxa(String name)
includeTaxa(String[] names)
isResolved(Natural taxonIndex, Natural charIndex)
isSequenceMissing(String name)
maxDifference(Natural index)
maxSpeciesDifference(Natural index)
meanDifference(Natural index)
meanSpeciesDifference(Natural index)
meanValue(Natural index)
minDifference(Natural index)
minSpeciesDifference(Natural index)
names()
nchar()
ntaxa()
percentageMissing(String name)
removeTaxa(String name)
removeTaxa(String[] names)
setHomeologPhase(String data_name, String tip_name)
setTaxonName(String current, String new)
setTaxonObject(String current, Taxon new)
show()
size()
taxa()
taxonIndex(String name)
var(Natural index)
varDifference(Natural index)
varSpeciesDifference(Natural index)
withinSpeciesVar(Natural species, Natural site)