Rev Language Reference


mvNarrowExchangeRateMatrix

Usage

mvNarrowExchangeRateMatrix(TimeTree tree, RateGenerator[] rateMatrices, RealPos weight, Probability tuneTarget)

Arguments

tree : TimeTree (<stochastic> pass by reference)
The tree variable on which this move operates.
rateMatrices : RateGenerator[] (<deterministic> pass by const reference)
The branch-specific rate matrices.
weight : RealPos (pass by value)
The weight determines the relative frequency with which this move will be attempted. For details, see the description of the 'moveschedule' parameter on the documentation page for 'mcmc()'.
Default : 1
tuneTarget : Probability (pass by value)
The acceptance probability targeted by auto-tuning.
Default : 0.44