Rev Language Reference


mvAddRemoveTip

Usage

mvAddRemoveTip(TimeTree tree, Bool extant, Bool extinct, Bool sa, RealPos weight, Probability tuneTarget)

Arguments

tree : TimeTree (<stochastic> pass by reference)
The tree on which this moves operates.
extant : Bool (pass by value)
Should we add/remove extant tips?
Default : TRUE
extinct : Bool (pass by value)
Should we add/remove extinct tips?
Default : FALSE
sa : Bool (pass by value)
Should we add/remove extinct tips as sampled ancestors?
Default : FALSE
weight : RealPos (pass by value)
The weight how often on average this move will be used per iteration.
Default : 1
tuneTarget : Probability (pass by value)
The acceptance probability targeted by auto-tuning.
Default : 0.44