dnOutgroupBirthDeath
lambda : | RealPos (pass by const reference) |
The constant speciation rate. | |
mu : | RealPos (pass by const reference) |
The constant extinction rate. | |
Default : 0 | |
rhoIngroup : | Probability (pass by const reference) |
The ingroup sampling probability. | |
Default : 1 | |
rhoOutgroup : | Probability (pass by const reference) |
The outgroup sampling probability. | |
Default : 1 | |
taxaOutgroup : | Taxon[] (pass by const reference) |
The taxa used for initialization. | |
samplingStrategyOutgroup : | String (pass by value) |
The sampling strategy of including outgroup taxa at the present. | |
Default : uniform | |
Options : uniform|diversified | |
samplingStrategyIngroup : | String (pass by value) |
The sampling strategy of including ingroup taxa at the present. | |
Default : uniform | |
Options : uniform|diversified | |
rootAge : | RealPos (pass by const reference) |
The time of the process starting at the root, if applicable. | |
samplingStrategy : | String (pass by value) |
The sampling strategy of including taxa at the present. | |
Default : uniform | |
Options : uniform|diversified | |
condition : | String (pass by value) |
The condition of the process. | |
Default : time | |
Options : time|survival|nTaxa | |
taxa : | Taxon[] (pass by const reference) |
The taxa used for initialization. | |
incompleteClades : | Clade[] (pass by const reference) |
Vector of incompletely sampled clades with number of missing species. | |
Default : NULL |