Rev Language Reference



  • dnFBDRP


dnFossilizedBirthDeathRange(RealPos rootAge/originAge, RealPos lambda, RealPos mu, RealPos psi, Probability rho, RealPos[] timeline, Natural k, String condition, Taxon[] taxa, Bool binary, Bool extended)


rootAge/originAge : RealPos (pass by const reference)
The start time of the process.
lambda : RealPos (pass by const reference)
The speciation rate(s).
mu : RealPos (pass by const reference)
The extinction rate(s).
Default : 0
psi : RealPos (pass by const reference)
The fossil sampling rate(s).
Default : 0
rho : Probability (pass by const reference)
The extant sampling fraction.
Default : 1
timeline : RealPos[] (pass by const reference)
The rate interval change times of the piecewise constant process.
Default : NULL
k : Natural (pass by const reference)
The fossil observation counts (total or [interval] or [interval][species]).
Default : NULL
condition : String (pass by value)
The condition of the process.
Default : time
Options : time|survival
taxa : Taxon[] (pass by const reference)
The taxa used for initialization.
binary : Bool (pass by value)
Treat fossil counts as binary presence/absence data?
Default : FALSE
extended : Bool (pass by value)
Treat tip nodes as extinction events?
Default : FALSE

Domain Type