Rev Language Reference


mnJointConditionalAncestralState

Usage

mnJointConditionalAncestralState(Tree tree, AbstractHomologousDiscreteCharacterData ctmc, TimeTree cdbdp, TimeTree glhbdsp, String type, Bool withTips, Bool withStartStates, Bool append, String filename, IntegerPos printgen, String separator, Bool version)

Arguments

tree : Tree (pass by reference)
ctmc : AbstractHomologousDiscreteCharacterData (pass by reference)
Default : NULL
cdbdp : TimeTree (pass by reference)
Default : NULL
glhbdsp : TimeTree (pass by reference)
Default : NULL
type : String (pass by value)
withTips : Bool (pass by value)
Default : TRUE
withStartStates : Bool (pass by value)
Default : TRUE
append : Bool (pass by value)
Should we append or overwrite if the file exists?
Default : FALSE
filename : String (pass by value)
The name of the file for storing the samples.
printgen : IntegerPos (pass by value)
The number of generations between stored samples.
Default : 1
separator : String (pass by value)
The separator/delimiter between columns in the file.
Default :
version : Bool (pass by value)
Should we record the software version?
Default : FALSE

Methods