Rev Language Reference



  • dnBDP


dnBirthDeath(RealPos lambda, RealPos mu, Probability rho, RealPos rootAge, String samplingStrategy, String condition, Taxon[] taxa, Clade[] incompleteClades)


lambda : RealPos (pass by const reference)
The speciation rate.
mu : RealPos (pass by const reference)
The extinction rate.
Default : 0
rho : Probability (pass by const reference)
The taxon sampling fraction.
Default : 1
rootAge : RealPos (pass by const reference)
The time of the process starting at the root, if applicable.
samplingStrategy : String (pass by value)
The sampling strategy of including taxa at the present.
Default : uniform
Options : uniform|diversified
condition : String (pass by value)
The condition of the process.
Default : time
Options : time|survival|nTaxa
taxa : Taxon[] (pass by const reference)
The taxa used for initialization.
incompleteClades : Clade[] (pass by const reference)
Vector of incompletely sampled clades with number of missing species.
Default : NULL

Domain Type