Rev Language Reference


fnFreeSymmetricRateMatrix

Usage

fnFreeSymmetricRateMatrix(RealPos[] transition_rates, Bool rescaled, String matrixExponentialMethod)

Arguments

transition_rates : RealPos[] (pass by const reference)
The transition rates between states.
rescaled : Bool (pass by value)
Should the matrix be normalized?
Default : TRUE
matrixExponentialMethod : String (pass by value)
The method used to compute the matrix exponential.
Default : scalingAndSquaring
Options : scalingAndSquaring|scalingAndSquaringPade|scalingAndSquaringTaylor|uniformization|eigen

Return Type