Rev Language Reference
dnPhyloMultiSampleOrnsteinUhlenbeckREML
Usage
dnPhyloMultiSampleOrnsteinUhlenbeckREML(Tree tree, RealPos alpha, Real theta, RealPos sigma, RealPos[] withinSpeciesVariances, Real rootStates, Natural nSites, Taxon[] taxa)
Arguments
| tree : | Tree (pass by const reference) |
| The tree along which the character evolves. | |
| alpha : | RealPos (pass by const reference) |
| The rate of attraction/selection (per branch). | |
| Default : 1 | |
| theta : | Real (pass by const reference) |
| The optimum value (per branch). | |
| Default : 1 | |
| sigma : | RealPos (pass by const reference) |
| The rate of random drift (per branch). | |
| Default : 1 | |
| withinSpeciesVariances : | RealPos[] (pass by const reference) |
| The per species within-species variances. | |
| rootStates : | Real (pass by const reference) |
| The vector of root states. | |
| Default : 0 | |
| nSites : | Natural (pass by value) |
| The number of sites which is used for the initialized (random draw) from this distribution. | |
| Default : 10 | |
| taxa : | Taxon[] (pass by value) |
| The vector of taxa which have species and individual names. |
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