Rev Language Reference


mvSubtreeSwap

Usage

mvSubtreeSwap(BranchLengthTree tree, RealPos weight, Probability tuneTarget)

Arguments

tree : BranchLengthTree (<stochastic> pass by reference)
The tree variable this move operates on.
weight : RealPos (pass by value)
The weight determines the relative frequency with which this move will be attempted. For details, see the description of the 'moveschedule' parameter on the documentation page for 'mcmc()'.
Default : 1
tuneTarget : Probability (pass by value)
The acceptance probability targeted by auto-tuning.
Default : 0.44